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  Protozoa
      Choanozoa
        Choanofila
            Choanoflagellatea
                    Acanthoecida
                            Acanthoecaceae
                            Stephanoecidae
                    Craspedida
                            Codonosigaceae
                            Salpingoecaceae
        Cristidiscoidea
            Cristidiscoidia
                    Nucleariida
                            Nucleariidae
                    Rozellida
                            Rozellidae
      Euglenophyta
            Bodonophyceae
                    Bodonales
                            Bodonaceae
                            Cryptobiaceae
                            Spiromonadaceae
                    Karotomorphales
                            Karotomorphaceae
            Euglenophyceae
                    Euglenales
                            Peranemataceae
                            Phacaceae
                            Protoastasiaceae
                    Eutreptiales
                            Astasiaceae
                            Eutreptiaceae
      Loukozoa
            Jakobea
                    Jakobida
                            Histionidae
                            Jakobidae
      Metamonada
        Trichozoa
            Trepomonadea
              Diplozoa
                    Distomatida
                            Hexamitidae
      Percolozoa
        Tetramitia
            Heterolobosea
                    Schizopyrenida
                            Tetramitaceae